Using human genomics to identify drug targets for progressive MS

Associate Professor Justin Rubio

THE FLOREY INSTITUTE OF NEUROSCIENCE AND MENTAL HEALTH, VIC

January 2024
Specialisation: Genetics, Epidemiology

focus area: A cure via repair and regeneration

funding type: Fellowship

project type: Investigator Led Research

Summary

Multiple sclerosis (MS) is a common cause of neurological disability in young adults, affecting almost 38,000 people in Australia and 2.9 million people globally. There are treatments for relapsing forms of MS, but these are mostly ineffective in treating people living with progressive MS.

Associate Professor Justin Rubio and his team will study genes from both single cells and human populations, to uncover any that may be involved in progressive MS and how they fit into the MS puzzle. Next, they will target these genes in human stem cells in the laboratory to understand their function in models of MS.

From this research, the team hope to discover potential drug targets for further investigation. The ultimate goal is to test newly developed drugs in clinical trials for progressive MS.

Progress

Over the past year, Associate Professor Rubio and his team have furthered their understanding of how microglia—the brain’s resident immune cells—may drive MS progression. Recent studies of Alzheimer’s disease show that somatic mutations (genetic changes that occur after birth) in microglia can promote harmful inflammation. There are also current trials in progressive MS that target microglia, including trials of Bruton’s tyrosine kinase (BTK) inhibitors.

The team has refined their methods for isolating microglia nuclei (that contain the genetic material) and applying highly sensitive DNA sequencing techniques. They have analysed brain tissue from three MS Australia Brain Bank tissue donors with MS and compared areas of damage (lesions) with healthy tissue. The researchers found unique somatic mutation patterns in microglia from lesions compared to non-lesion brain tissue. Using the methods developed in the first year of this project, Associate Professor Rubio was also awarded an MS Australia Incubator Grant.

This year, Associate Professor Rubio and his team will focus on isolating microglia nuclei and sequencing and analysing data from lesions and non-lesion tissue from a further 10 MS Australia Brain Bank tissue donors. This research could open new avenues of investigation for treating progressive MS. Progressive MS is a very important treatment challenge facing the MS community. Access to effective treatments to slow down or prevent MS progression will improve the quality of life for people living with MS.

publications

  • Motyer A, Jackson S, Yang B, Harliwong I, Tian W, Shiu WIA, Shao Y, Wang B, McLean C, Barnett M, Kilpatrick TJ, Leslie S, Rubio JP. Neuronal somatic mutations are increased in multiple sclerosis lesions. Nat Neurosci. 2025 Apr;28(4):757-765. doi: 10.1038/s41593-025-01895-5. Epub 2025 Mar 4. PMID: 40038527
  • Blackburn NB, McComish BJ, Motyer A, Slimmer JC, Leslie SJ, Broadley SA, Jokubaitis VG, Van Der Walt A, Kermode AG, Lechner-Scott J, Parnell GP, Fabis-Pedrini MJ, Scott RJ, Jackson S, Maltby VE, Charlesworth JC, Burdon KP, Taylor BV, Kilpatrick TJ, Rubio JP. Rare variation in neurological disease genes and its role in multiple sclerosis mimicry and phenotype. Genome Medicine 17, 149 (2025). https://doi.org/10.1186/s13073-025-01582-x

Last updated 31 March 2026

lead investigator

total funding

$650,000

start year

2024

duration

5 years

STATUS

Current project

Stages of the research process

Fundamental laboratory Research

Laboratory research that investigates scientific theories behind the possible causes, disease progression, ways to diagnose and better treat MS.

Lab to clinic timeline

10+ years

Translational Research

Research that builds on fundamental scientific research to develop new therapies, medical procedures or diagnostics and advances it closer to the clinic.

Lab to clinic timeline

5+ years

Clinical Studies and Clinical Trials

Clinical research is the culmination of fundamental and translational research turning those research discoveries into treatments and interventions for people with MS.

Lab to clinic timeline

3+ years

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Using human genomics to identify drug targets for progressive MS